Identifying the sub-population in the image window – ChemoMetec NC-3000 User Manual

Page 13

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Identifying the Sub-Population in

the Image Window

One of the advantages of image cytometry is that cells defined in a particular
sub-population can be identified in the image acquired for analysis. This is
done when the image file for the analysis is loaded in main window and sub-
populations have been defined by polygons, quadrants or markers.

Open the desired graph containing the polygon, quadrant or marker
identifying the sub-population.
Select the sub-population by clicking on the gating lines so that it ap-
pears red.
Right-click and choose the appropriate option, for example ‘Add cells in-
side/outside gate to image overlay’.
The events in a scatter plot will be highlighted and the corresponding
cells in the image will be marked by colored boxes.
To de-select the cells in the image, right-click in the plot area and select
‘Delete Image Overlay’ or right-click on the image overlay button in the
image window and select ‘Delete Image Overlay’.

Gating Cell Populations for Inclu-

sion/Exclusion in Analysis

Particular sub-populations of observed events can be either included or
excluded in the data analysis using gating options. The sub-populations are
those defined by the polygons, quadrants and markers.

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