Epson WorkForce Pro WF-M5799 Workgroup Monochrome Multifunction Printer with Replaceable Ink Pack System - Manual (Page 226)

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You see a window like this:
9. Select the method you used to separate the originals as the Separator setting.
Note: See the help information in Document Capture Pro for details.
10. If necessary, select Create Folder and select a folder name.
11. Select any other folder naming settings you want and click OK , then click OK again.
Your originals are saved into separate files and folders as specified.
Parent topic: Scanning Special Projects