3 peptide analysis buffers, 4 sample preparation, 5 running conditions – Bio-Rad Mini-PROTEAN® TGX™ Precast Gels for 2-D Electrophoresis User Manual

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Running buffer (1x)

100 mM Tris, 100 mM Tricine, 0.1% SDS

Dilute 100 ml 10x stock (catalog #161-0744) with 900 ml diH

2

O

Sample buffer

200 mM Tris-HCl, pH 6.8, 2% SDS, 40% glycerol, 0.04% Coomassie

(catalog #161-0739)

Brilliant Blue G-250, 2%

β-mercaptoethanol or 100 mM DTT (added fresh)

6.4 Sample Preparation

1. Determine the appropriate concentration of sample to load (depends on the load volume and the

detection method used; see Chapter 10 for approximate stain sensitivities).

2. Dilute the sample with at least an equivalent volume of sample buffer (catalog #161-0739) and

reducing agent (

β-mercaptoethanol, for example). Heat the diluted sample at 90–95°C for 5 min,

or at 70°C for 10 min.

For example, combine:

5 μl sample

4.75 μl Tricine sample buffer (catalog #161-0739)

0.25

μl

β-mercaptoethanol (catalog #161-0710)

10

μl

total

volume

6.5 Running Conditions

Table 6.1. Running conditions for one (1) Mini-PROTEAN Tricine gel in the Mini-PROTEAN Tetra cell . Run conditions
and times are approximate and assume a constant voltage of 100 V. When running more than one gel, current will differ.

16 .5% Gels

10–20% Gels

Power conditions

100 V constant

100 V constant

Expected current (per gel)

Initial

65 mA

65 mA

Final

35 mA

35 mA

Run time

100 min

100 min

See Appendix B for buffer formulations. Do not adjust pH unless instructed to do so.

6.3 Peptide Analysis Buffers

Instruction Manual and Application Guide

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