4 sample preparation, 5 running conditions, 3 nondenaturing nucleic acid page buffers – Bio-Rad Mini-PROTEAN® TGX™ Precast Gels for 2-D Electrophoresis User Manual

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7.3 Nondenaturing Nucleic Acid PAGE Buffers

See Appendix B for buffer formulations. Do not adjust pH unless directed to do so.

Running buffer (1x)

89 mM Tris, 89 mM boric acid, 2 mM EDTA

Dilute 100 ml 10x stock (catalog #161-0733) with 900 ml diH

2

O

Sample buffer (5x)

50 mM Tris-HCl, pH 8.0, 5 mM EDTA, 25% (w/v) glycerol, 0.2% bromophenol

(catalog #161-0767)

blue, 0.2% xylene cyanole FF

7.4 Sample Preparation

Determine the DNA concentration of your sample based on the detection method used. (See Chapter 10
for approximate stain sensitivities.) Dilute 4 parts sample with 1 part sample buffer.

7.5 Running Conditions

Table 7.1. Running conditions for nondenaturing nucleic acid PAGE with one (1) Mini-PROTEAN TBE gel in the
Mini-PROTEAN Tetra cell.
Run conditions and times are approximate and assume a constant voltage of 100 V. When running
more than one gel, current will differ.

5% Gels

10% Gels

15% Gels

4–20% Gels

Power conditions

100 V constant

100 V constant

100 V constant

100 V constant

Expected current (per gel)

Initial

15 mA

15 mA

15 mA

15 mA

Final

10 mA

10 mA

10 mA

10 mA

Run time

45–60 min

60–75 min

75–90 min

90–105 min

Instruction Manual and Application Guide

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