iii
Navigating 1D Analysis ............................................................................................................................ 60
1D Analysis Plugin Module ...................................................................................................................... 60
1D Analysis Context Menu Commands ................................................................................................... 62
Finding Lanes and Bands ........................................................................................................................ 62
1D Analysis Image Window Features ...................................................................................................... 64
1D Analysis Settings ................................................................................................................................ 65
Manually Modifying Lanes and Bands ..................................................................................................... 65
Lane and Band Information ..................................................................................................................... 68
Lane Profile Graph ................................................................................................................................... 69
Viewing and Printing 1D Gel Analysis ..................................................................................................... 71
Viewing Data Explorer Results ................................................................................................................ 72
Printing Data Explorer Tabular Reports ................................................................................................... 75
Performing Concentration Calibrations .................................................................................................... 77
Performing Molecular Weight Calibration ................................................................................................ 82
Retardation factor (Rf) Lines .................................................................................................................... 86
Performing Dendrogram Analysis ............................................................................................................ 87
Performing Colony Counting ....................................................................................................................... 91
Colony Count Module .............................................................................................................................. 91
Preference Settings for Colony Counting ................................................................................................ 92
Automatic Counting .................................................................................................................................. 93
Manual Counting ...................................................................................................................................... 93
Manual Counting Step 1: Select Classes ................................................................................................ 94
Manual Counting Step 2: Finish ............................................................................................................... 94
Edit Colonies ............................................................................................................................................ 95
Add Colonies ............................................................................................................................................ 95
Delete Colonies ........................................................................................................................................ 96
Split Colonies ........................................................................................................................................... 96
Merging Colonies ..................................................................................................................................... 97
User Defined Template Counting ............................................................................................................ 97
Spiral Counting ........................................................................................................................................ 97
Zone Analysis .......................................................................................................................................... 98
Renumbering Colony/Zone Values .......................................................................................................... 99
Reporting Functions ................................................................................................................................. 99
Classes .................................................................................................................................................... 99
Statistics ................................................................................................................................................. 100
Distribution ............................................................................................................................................. 100
Export and Print Colony Results ............................................................................................................ 100
Printing Reports and Images .................................................................................................................... 101
File Print Command ............................................................................................................................... 101
