Normalizing volume data – Bio-Rad Image Lab™ Software User Manual

Page 143

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Normalizing Volume Data

User Guide | 143

Delete — deletes a band from a lane. Use this feature to remove bands

that are not relevant to your analysis. Click Delete, and then click on the

band you want to remove.

Adjust — adjusts the height of a band. Click Adjust. Boundary lines appear

on either side of each band. Move the cursor over a boundary line until you

see a double-headed arrow. Move the boundary line up or down. The

center is recalculated and the band appears there.

Note: You can also adjust band boundaries in the Lane Profile view.

Normalizing Volume Data

There are several reasons why you might want to normalize the volume data in

multichannel images:

The lanes are loaded with the same volume, but you do not know the total

protein in each lane.

Pipetting errors result in variations in the lane volumes.

Differences occur in the transfer of protein from a gel to a membrane.

You can correct for these differences by normalizing the volume data. There are two

ways to normalize volume data:

Total Lane Protein Normalization – one lane in the normalization channel

is used to calculate the normalization factor.

Housekeeping Protein Bands Normalization – a single band of a

housekeeping protein is used to calculate the normalization factor. In order

to get accurate results, the housekeeping protein must be stable and

impervious to the treatments in your experiment. It must be the same in

pretreatment and post-treatment.

In both cases, the normalization factor is then used to calculate the normalized

volumes in the lanes for all channels.

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