HP Data Explorer 4 Series User Manual

Page 407

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Using the Peptide Fragmentation Toolbox

Data Explorer

Software User’s Guide

C-11

C

y and b pairs

Lists peak pairs whose

combined masses plus 1 Da add up to the
Precursor Ion Mass you specified on the
Setup tab.

Loss of H2O

Lists peak pairs with a 18 Da

mass difference.

3.

To remove all pairs results, click Clear List.

4.

To remove a mass from the Spec Peak List (to simplify the
sequence interpretation), select an entry in the pairs
results, then click Left or Right under Remove Mass.

5.

Click Copy to Output Window Result Tab to copy
results to the Result tab. You can then copy from the
Result tab to another application such as Notepad, or
print, as needed.

Sequence

To list ion sequences:

1.

Click the Sequence tab.

Figure 3-12 Peptide Fragmentation

Sequence

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