Bio-Rad iQ™5 Optical System Software, Version 2.1 User Manual

Page 103

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Section 6 Data Analysis Module

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Graph Error Options

The default presentation for the error bars is +/– one standard deviation (Figure 6.54). You can
change the multiplier to get +/– 2 or 3 standard deviations.

Fig. 6.54. Selecting Error Bar options for Gene Expression Analysis.

Gene Expression Module Context Menu

Right-clicking on the gene expression chart will reveal the context menu shown in Figure 6.55.

Fig. 6.55. The Gene Expression Chart Context Menu.


Sorting Option

Sorting Option (Figure 6.56) allows you to sort of the Gene and Condition Names on the chart
display. When the Sorting Option is selected, a Sort Options menu box is displayed. The menu
box is divided into three sections: Groups, Options, and the Group member list. Use the Groups
radio buttons to view a list of Gene Names or Condition Names configured in your data set.

With the Options radio buttons, you can elect to organize the names within the Group member
list alphabetically, or to rearrange these items manually

Alphabetic order: The default selection for Groups is Gene Names and the default
selection for Options is Alphabetical order. The arrows buttons to the right of the group
member list can be used to toggle between an alphabetical sort of the group members in
ascending or descending order

Manual order: To rearrange Gene or Condition Names manually, select the radio button
for Manual order. Select the group member that you would like to re-order and use the

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