Bio-Rad EXQuest Spot Cutter - Manual (Page 328)

Mass Spectrometry Analysis
10-5
Fig. 10-1. Example of the Hit Table annotation category and entries.
In addition, the protein name is included in the standard protname category (which
will be created if it doesn’t already exist), so you can sort the spots by protein name in
the Select Spot list.
Note: Each category is specific for the mass spec instrument used. For example, if you
import information from both MALDI and MS/MS, you would create both a Hit
Table (MALDI) category and a Hit Table (MS/MS) category.
10.3 Mass Spec Score Overlay
If you have imported mass spec data for spots using Import MassLynx Results, you
can display overlays indicating the confidence level of the mass spec protein
identification.
Select Mass Spec Score Overlay from the Identification menu.